9fca24b8-abb8-4c33-92fa-81fba5b7594d

ENTITY_CREATED · recorded 2026-09-04T23:39:12.861454379+00:00

Transaction

TypeENTITY_CREATED

Subjectentity · Les_Cottes_final.SG

Actoradna-ingest-pipeline

Institution—

Recorded at2026-09-04T23:39:12.861454379+00:00

Effective at—

Domain moduleancient-dna

Schema version1

Input entitiesnone

Output entitiesLes_Cottes_final.SG

Revision ofno earlier revision on record

Payload

age_at_deathUnknown

data_type{"Known":"Shotgun"}

date_full_info{"Known":"\"41201-40596 calBCE (39485±271 BP, MAMS-26196)\""}

date_mean_bp{"Known":"42846"}

date_method{"Known":"Direct: IntCal20"}

date_sd{"Known":"163"}

group_id{"Known":"LesCottescave_Neanderthal"}

individual_id{"Known":"Les_Cottes_final"}

latitude{"Known":46.445}

locality{"Known":"\"Les Cottés cave (Nouvelle-Aquitaine, Vienne, Montmorillon, Journet)\""}

longitude{"Known":0.963}

master_id{"Known":"9508"}

political_entity{"Known":"France"}

skeletal_code{"Known":"Les Cottes Z4-1514"}

skeletal_element{"Known":"tooth"}

unrecognized_columns{"\"ASSESSMENT WARNINGS: X contamination interval is listed if lower bound is >=0.005 for either ANGSD or hapConX, \"\"QUESTIONABLE\"\" if lower bound is 0.015-0.035 for hapConX (or ANGSD if no hapConX computation), \"\"CRITICAL\"\" or \"\"FAIL\"\" if lower bound is >0.03 for hapConX (or ANGSD if no hapConX computation) |mtcontam confidence interval is listed if coverage >10 and upper bound is <0.98, \"\"QUESTIONABLE\"\" if upper bound is 0.9-0.95; \"\"CRITICAL\"\" if upper bound is <0.9, QUESTIONABLE status gets overriden by ANGSD or hapConX if upper bound of contamination estimate is <0.01 | damage for ds.half is \"\"CRITICAL/FAIL\"\" if <0.01, and recorded but passed if 0.01-0.03; libraries with untreated last base are \"\"CRITICAL\"\" or \"\"FAIL\"\" if <0.01, \"\"QUESTIONABLE\"\" if 0.01-0.03, and recorded but passed if 0.03-0.1 | sex.ratio is QUESTIONABLE if [0.03,0.1) or (0.30,0.32]; CRITICAL/FAIL if [0.1,0.3] | f4(All,Damage;CEU,CHB) for non-damage-restricted samples is \"\"CRITICAL/FAIL\"\" if |Z|>=3.5, QUESTIONABLE if 3.5>Z>=3.0, listed if Z>=2.0\"":"repull as damage restricted version to match published data","\"Library type (minus=no.damage.correction, half=damage.retained.at.last.position, plus=damage.fully.corrected, ds=double.stranded.library.preparation, ss=single.stranded.library.preparation)\"":"ss.minus","ANGSD MOM 95% CI truncated at 0 (only if male and >=200 SNPs) [estimates are typically 0.005 too high]":"n/a (female)","Mean coverage on non-targeted autosomal SNPs for full bam - not yet computed if \"\"..\"\" and bam restricted to on-target SNPs if \"\"0\"\"":"2.00138507","Pulldown Strategy":"Native Pulldown on 3.2M snpset","SNPs hit on autosomal targets (Computed using easystats on 1240k snpset)":"757353","SNPs hit on autosomal targets (Computed using easystats on Compatibility snpset)":"822352","SNPs hit on autosomal targets (Computed using easystats on Compatibility_HO snpset)":"178440","SNPs hit on autosomal targets (Computed using easystats on HO snpset)":"373375","SNPs hit on autosomal targets (Computed using easystats on enhance 2M capture subset)":"1229027","Suffices (indicating data types used for sources which can be a subset of that in bam)":"SG","Sum total of ROH segments >20cM":"82.271089","hapConX 95% CI truncated at 0 (only if male and >=2000 SNPs covered on X chromosome) [estimates are typically 0.005 too high]":"n/a (female)"}

Decoded from the canonical CBOR payload — the exact bytes the chain commits to.

Source references

AADR v66 (dataverse.harvard.edu/api/access/datafile/13994515)

Integrity

Payload hash: 0x5f34…250a
Signing key: authority-1
Signature: 0x6cab…8c0b

Verification

all checks passed

Transaction structure validpassed
Payload hash matches recorded hashpassed
Merkle proof matches block headerpassed

Full digests

Payload hash0x5f34a1eea52192fd35d95495be5156c0773d5c6f29755fa969e28fdf74e2250a

Signature0x6cab9da576f0183d4564ca79a40a1aa96ec3e4814530a1650102e8e04c6ecefcb2342729efae8daae56a7f23a1383b640b13ef775f54ce80dd00104f44b58c0b